Parameter

Description

Use Full Set of Dimensions

Select this option if you want to export all dimensions without changing them.

Define Subset

Select this option if you only want to export individual dimensions or subsets of individual dimensions.

Each of the sections described below is only visible if the corresponding dimension is present in the input image.

Parameter

Description

Channels

Here you can select which channels of the input image you want to be used. All channels are selected by default. To deselect a channel, click on the relevant channel button.

Z-Position, Time, Block, Scene

Here you can select which parts of the input image you want to use for the resulting image.

-

Extract All

If selected, all parts of the corresponding image are extracted.

-

Extract Single

If selected, you can select a single image to be extracted.

-

Extract Range

If selected, you can select a certain range of images to be extracted.

-

Extract Multiple

If selected, you can select several continuous ranges and individual sections.

Enter one or more sections that you want to select in the input field. To do this, enter the first section, followed by a minus sign, and then the last section. If you want to define an interval, after the last section enter a colon and then the interval. The entry "2-10:2" means that every second section is selected from section 2 to section 10.

Enter a comma after the first section if you want to define another section. You can also select individual sections separated by commas. By entering "2-10:2,14-18,20,23", you select every second section from section 2 to section 10, followed by sections 14 to 18, as well as sections 20 and 23.

-

Get current position

Adopts the position from the current display in the image area.

-

Interval

Activated: Interval mode is active. The Interval spin box/input field appears.
Enter the desired interval here. E.g. if you enter the value 2 only every 2nd value from the range is considered.

Region

Here you can select if you want to use the entire image or just a region (ROI) of the input image. Note that in combination with image dimensions, the rectangle is only drawn into one and only this is considered for export. For example, in an image with multiple scenes, the image export only considers the ROI that is always drawn into the currently displayed scene defined by the Dimensions view options tab.

-

Full

If selected this option, the full image is used for the new image.

-

Rectangle Region (ROI)

If selected this option, you can draw in a rectangle region of interest which is used for creating a new image.

If a rectangle region is drawn in, you can see and change its coordinates by editing the input fields for X, Y, W, and/or H.

Tiles

Not available for the OME TIFF Export.

-

Export Selected Tiles

Exports the tiles according to the selected original image.

-

Crop to Selection and Generate New Tiles

Creates new tiles according to your entries in the fields Columns/Rows and Overlap.

-

Columns/Rows

Only available if Crop to Selection and Generate New Tiles is activated.
Defines, with how many rows and columns the re-tiling is performed.

-

Overlap

Only available if Crop to Selection and Generate New Tiles is activated.
Defines the overlap of the re-tiled tiles in %.