Using an Intellesis Segmentation Model for Image Analysis
Once you have trained a model for segmentation, you can use it for Image Analysis. To use the trained model, you must first create a new image analysis (IA) setting (*.CZIAS format). Using segmentation models also requires the installation of Docker Desktop and a corresponding segmentation container. To use the trained model there are two options:
- Create a new image analysis setting from the Intellesis segmentation model. This is the only option for Intellesis segmentation models trained on a multi-channel image.
- Use an Intellesis segmentation model in the Automatic Segmentation step of an image analysis setting, see Automatic Segmentation. This option is only possible for models trained on single channel images but allows you to create image analysis settings with a complex hierarchy.
- You are in Manage Templates.
- Docker Desktop is installed together with the segmentation container and running.
- In the Show dropdown list, select Intellesis Segmentation Models.
- All available segmentation models are displayed.
- Right click the list entry of a segmentation model and select Create Analysis Setting.
- The setting is saved as *.czias file in the default folder for image analysis settings (usually ProgramData/Carl Zeiss/ZENCore/UserArchive/Image Analysis Settings).
- You have created an analysis setting from your segmentation model. When you have the Image Analysis tool available, you can select the settings file from the dialog. Note that the setting is only available in the dialog when you have used the default folder for saving. Otherwise, the setting must be loaded from the file system (specific location) via the import functionality. The model is loaded with the predefined classes. You can continue with setting up an image analysis using the Intellesis trained segmentation model.
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