Configuring Multi-Channel Acquisition with Smart Setup
If Smart Setup is unable to make a proposal, it is not possible to use the selected combination of dyes and contrast methods with the current microscope hardware to make acquisitions.
Select other dyes or another contrast method.
- Select Free Mode > 2D Multi-Channel Acquisition workbench > Channels tool > Open Smart Setup.
- The Smart Setup dialog opens.
Smart Setup does not contain any dyes, contrast methods, or proposals. - To add a dye or contrast method, click + Dyes & Contrast Methods.
- The Add Dye or Contrast Method dialog opens.
- From the Dye Database list, select a fluorescent dye. Use the Search field to find the desired dye quickly, and double-click to add the selected dye.
- From the Contrast Methods list, select the corresponding contrast method, double-click to add the selected contrast method.
Note that you can only add channel combinations where a suitable proposal can be made based on the available hardware. - Close the dialog when you have selected the desired channels.
- The selected dyes will be listed in the Recently Used list for your next multi-channel acquisition configuration.
- The proposal is displayed in the Smart Setup dialog.
- From the Proposals for Acquisition Parameters, select the desired parameter, see Buttons to Optimize Acquisition Parameters.
- Click OK.
- You have configured multi-channel acquisition with Smart Setup. Proceed in the 2D Multi-Channel Acquisition workbench to acquire multi-channel images. In the Channels tool, a list with the selected dyes is displayed.
See also
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