Analysis

On arivis Hub DMS you have the possibility to upload and run analysis pipelines created with arivis Pro. This functionality is only available if you have the necessary license.

A pipeline file can be uploaded like any other file. When selecting an image or a pipeline file, the Information panel on the right displays details about analysis runs for the respective file as well as more details about the pipeline. Additionally, you have a dedicated view that displays all analysis runs and the results. If you share a project that contains analysis pipelines, those pipelines and the analysis runs within the project are also shared with the other user.

Starting an Analysis Run by Selecting Images

You have an analysis pipeline and suitable images.

Navigate to your folder and select the images you want to analyze.
The options in the Data Toolbar are displayed.
In the Data Toolbar, click the Run button.
A window for pipeline selection opens and displays available pipelines.
Select a pipeline and click Next.
An overview window opens. If selected images do not match the required properties for the pipeline, a message is displayed, and the respective images are indicated in the list.
Check all settings and selected images and click Run.
The analysis run starts as defined. The status and results can be checked in the Analysis Runs view.

Opening Results of an Analysis Run

You have started an analysis run.

In the Menu Bar on the left, click the Analysis Runs icon.
The Analysis Runs view opens and displays a list of all analysis runs.
Double click the entry for the run you want to view. Alternatively, click the context menu button and select Open. To open the data in a new browser tab, click the context menu button and select Open in new tab, or press Ctrl while clicking on the analysis run.
The respective analysis run opens and the results are displayed, see Analysis Results View.

Opening an Analysis Run from a File

You have started an analysis run.

In the Projects & Data view, select the image or pipeline file used for the analysis.
The Information panel on the right displays details for the file.
In the Information panel, open the Analysis Run section and click the run you want to open. To open the data in a new browser tab, press Ctrl while clicking on the analysis run. Alternatively, click the context menu button for a run and select Open or Open in new tab.
The respective analysis run opens and all files of the run are displayed, see Analysis Results View.

Deleting an Analysis Pipeline

Navigate to the project and folder where your pipeline is saved.
The content of the project or folder is displayed.
Click the context menu button for the pipeline and select Move to recycle bin.
A confirmation dialog is displayed.
Click Move.
The pipeline is moved to the recycle bin. The analysis runs performed with this pipeline are not deleted.

Downloading Analysis Results for All Images of an Analysis Run

You have opened the results of an analysis run, see Opening Results of an Analysis Run.

To download the results of all images, click the global context menu button.
The menu entries are displayed.
Select Download results. If you want to have all .csv results merged into one document, select Download merged results.
The results for all images of the analysis run are downloaded as a .zip file. If you have selected Download results, the downloaded folder contains the results of each individual image and its sub-executions. For Download merged results, the .csv results of all images and sub-executions are merged into one .csv document.

Downloading Analysis Results for One Image

You have opened the results of an analysis run, see Opening Results of an Analysis Run.

To download the results of a particular image, click the context menu button of the entry in the list.
The menu entries are displayed.
Select Download results.
The analysis results of this image are downloaded as a .zip file. The folder contains the outputs defined in the pipeline for all sub-executions of the image.

Analysis Runs View

Menu Bar

Here you can switch between the different main views, see Menu Bar.

List of Analysis Runs

Here you have a list of all analysis runs. It displays general information like the name or creator, as well as specific information like the status of the run. You can sort the list with the menu on the top right, or by clicking a list header. The second menu in the top right enables you to select which list columns are displayed.

Information Panel

Here you can show or hide the Information panel which displays information about the selected run, see Information Panel. The information is grouped into different expandable/collapsible sections, including dedicated sections with information about the respective analysis run and the used analysis pipeline.