Detecting cells (Seeded Region Growing)
Workflow
Demo dataset
The data set is a multi-dimensional, discrete representation of your real sample volume. It can be structured as a z-series of planes (optical slices) of multiple channels (dyes) in a temporal sequence of time points located at multiple spatial positions. Usually, the dataset shows a single experimental situation. A complete experiment can be composed by several datasets. The datasets are available as graphic files saved in plenty of file formats (standard formats as well as proprietary formats).
The link for the specific demo dataset for this guide is displayed below. All datasets are listed here: https://demodata.arivis.com
Opening demo dataset
- Click File > Open...
- Select the *.sis file from the Windows Explorer.
- The demo dataset is displayed in the viewer. The dataset is visualized according to the current rendering setting parameters.
Viewing the results
- If not already visible, open the Objects dialog. In Shortcut Toolbar, click Objects table
.
- Measurements are now visible in the objects table.
- To add or remove table columns, click Feature Columns...
For more information, refer to the Online Help (F1).