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SIS Converter Universal Converter for the Most Common Scientific Imaging File Formats

Opening the arivis SIS Converter Execute arivis SIS Converter by clicking on the related icon on the desktop. The arivis SIS Converter dialog opens.

Using SIS Converter

SIS Converter (Pro) 4.1 Release Announcing the latest release of the arivis SIS Converter and arivis SIS Converter Pro

Supported image formats arivis SIS Converter supports a large number of image formats. Media handlers are extension plug-ins which enable arivis SIS Converter to import and export files in various file formats.

See also Performing SIS file optimization SIS Converter (Pro) 4.1 Release Image Registration for Multiplexing Experiments in arivis Pro Creating random sub-population of objects Getting started with arivis Pro

Converting Cellpose models for use in arivis Instructions for the Cellpose to ONNX conversion script. See also Creating freely XY oriented sub volumes Performing SIS file optimization Creating random sub-population of objects

Dicom Media Handler The Dicom media handler enables arivis SIS Converter to read DICOM containers or DICOMDIR files.

See also Converting Cellpose models for use in arivis Creating random sub-population of objects Performing SIS file optimization

one data set) Possible problem with Nikon ND2 import for pre-stitched data Avoid conversion history corruption Small UI glitches Separate Start Menu entries for the free and the pro version Avoid infinite loop with the same source and destination folders (SIS

Importing files To import images, choose Add Files... from the main menu, or drag and drop files or folders onto an open arivis SIS Converter window.

Supported Image File Formats SIS Converter and Converter Pro *as of Dec 2022* Abberior Imspector (.obf, .msr) AmiraMesh (*.am) Aperio SVS (*.svs) arivis Single Image Stack 3 (*.sis) BigDataViewer file format (*.xml) CompuServe GIF (*.gif, *.giff) DeltaVision

Instead, arivis uses a redundancy-free file structure where the resolution is calculated as needed, meaning that even without compression the converted SIS file will typically be as little as a few 100MB larger than the raw image data.