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Contextualising segmentation to Atlas regions This article explains how to use the Compartments operation with imported Atlas objects to get segmentation results per atlas regions.

Background Anatomical atlases are valuable tools in contextualizing segmentation results by allowing users to not only get object counts and morphologies, but also knowing how these change in various regions of an organism or organ.

What is segmentation This article explains the basic principle of segmentation for people who are new to imaging.

In this article, we look at how we can use compartments and custom features to identify which objects are inside other objects and then use Custom Features to get statistics like the ratio of the parent objects covered by children.